631 Determining intra-tumoral heterogeneity and immune escape mechanisms in melanoma using spatial transcriptomics

نویسندگان

چکیده

Melanoma, like other cancers, originates from a single clone. As the cancer progresses, tumor thickens and immune evasion ensues. However, few studies have investigated mechanisms involved in these processes using spatial transcriptomics. We aimed to elucidate genetic transcriptional heterogeneity relation melanoma thickness explore molecular related escape. Five punch-biopsied fresh tissue samples saliva were obtained patient used for paired whole exome sequencing. The subsequent excision specimen was prepared formalin-fixed paraffin-embedded block profiled DNA-level mutation accumulation commensurate with of melanoma. Spatial transcriptome analysis indicated that involves changes antigen presentation as well defects β2-microglobulin human leukocyte class I processing. Levels molecules, which are critical T cell recognition antigens, tended significantly decrease depth increased. also found expression caspases interferon alpha inducible protein-encoding genes inversely correlated thickness. study based on sampling lesion patient. transcriptomics can increase our mechanistic understanding

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ژورنال

عنوان ژورنال: Journal of Investigative Dermatology

سال: 2022

ISSN: ['1523-1747', '0022-202X']

DOI: https://doi.org/10.1016/j.jid.2022.05.642